Package: SurrogateBMA 1.0
SurrogateBMA: Flexible Evaluation of Surrogate Markers with Bayesian Model Averaging
Provides functions to estimate the proportion of treatment effect explained by the surrogate marker using a Bayesian Model Averaging approach. Duan and Parast (2023) <doi:10.1002/sim.9986>.
Authors:
SurrogateBMA_1.0.tar.gz
SurrogateBMA_1.0.zip(r-4.7)SurrogateBMA_1.0.zip(r-4.6)SurrogateBMA_1.0.zip(r-4.5)
SurrogateBMA_1.0.tgz(r-4.6-x86_64)SurrogateBMA_1.0.tgz(r-4.6-arm64)SurrogateBMA_1.0.tgz(r-4.5-x86_64)SurrogateBMA_1.0.tgz(r-4.5-arm64)
SurrogateBMA_1.0.tar.gz(r-4.7-arm64)SurrogateBMA_1.0.tar.gz(r-4.7-x86_64)SurrogateBMA_1.0.tar.gz(r-4.6-arm64)SurrogateBMA_1.0.tar.gz(r-4.6-x86_64)
SurrogateBMA_1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
SurrogateBMA/json (API)
| # Install 'SurrogateBMA' in R: |
| install.packages('SurrogateBMA', repos = c('https://yunshandys.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/yunshandys/surrogatebma/issues
- exampleData - Example data
Last updated from:60a8a205d2. Checks:13 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 136 | ||
| linux-devel-x86_64 | OK | 134 | ||
| source / vignettes | OK | 174 | ||
| linux-release-arm64 | OK | 183 | ||
| linux-release-x86_64 | OK | 132 | ||
| macos-release-arm64 | OK | 234 | ||
| macos-release-x86_64 | OK | 398 | ||
| macos-oldrel-arm64 | OK | 187 | ||
| macos-oldrel-x86_64 | OK | 343 | ||
| windows-devel | OK | 113 | ||
| windows-release | OK | 129 | ||
| windows-oldrel | OK | 136 | ||
| wasm-release | OK | 133 |
Exports:cv.npfpred.intgen.priorgpxi_intpost.modelpost.thetapred.funcR.BMA.estR.BMAonlyR.m.thetarcpp_hello_world
Dependencies:codalatticeMASSMatrixMatrixModelsmcmcMCMCpackmvtnormquantregRcppRcppEigenRcppNumericalRsurrogateSparseMsurvival
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Example data | exampleData |
| Generates the default prior hyperparameters | gen.prior |
| Calculates the posterior probability of the candidate models | post.model |
| Calculates the proportion of treatment effect explained | R.BMA.est |
